Automated side-chain model building and sequence assignment by template matching
نویسندگان
چکیده
منابع مشابه
Automated side-chain model building and sequence assignment by template matching
An algorithm is described for automated building of side chains in an electron-density map once a main-chain model is built and for alignment of the protein sequence to the map. The procedure is based on a comparison of electron density at the expected side-chain positions with electron-density templates. The templates are constructed from average amino-acid side-chain densities in 574 refined ...
متن کاملAutomated main-chain model building by template matching and iterative fragment extension
An algorithm for the automated macromolecular model building of polypeptide backbones is described. The procedure is hierarchical. In the initial stages, many overlapping polypeptide fragments are built. In subsequent stages, the fragments are extended and then connected. Identification of the locations of helical and beta-strand regions is carried out by FFT-based template matching. Fragment l...
متن کاملEvaluation of Similarity Measures for Template Matching
Image matching is a critical process in various photogrammetry, computer vision and remote sensing applications such as image registration, 3D model reconstruction, change detection, image fusion, pattern recognition, autonomous navigation, and digital elevation model (DEM) generation and orientation. The primary goal of the image matching process is to establish the correspondence between two ...
متن کاملAutomated Model Building
Preface On the history of the book: In the early 1990s several new methods and perspectives in automated deduction emerged. We just mention the superposition calculus, meta-term inference and schematization, deductive decision procedures, and automated model building. It was this last field which brought the authors of this book together. In 1994 they met at the Conference on Automated Deductio...
متن کاملMicropower Analogue Building Blocks for Template Matching in Implantable Devices
The design of analogue low power VLSI building block is very important for implantable devices, like cochlear implants and implantable cardioverter deebril-lators(ICD). In this paper we describe the micropower analogue building blocks for implementing the template matcher used for intracardiac electrogram (ICEG) clas-siication and data compression in an ICD. These blocks were fabricated using O...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Acta Crystallographica Section D Biological Crystallography
سال: 2002
ISSN: 0907-4449
DOI: 10.1107/s0907444902018048